Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.69□□□□□ -0.38
Msx1P13297 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Msx1P13297 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msx1P13297 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Msx1P13297 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msx1P13297 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msx1P13297 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Msx1P13297 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.69□□□□□ -0.38
Msx1P13297 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msx1P13297 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.69□□□□□ -0.38
Msx1P13297 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msx1P13297 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msx1P13297 Gm22709-201ENSMUST00000116893 111 ntBASIC12.69□□□□□ -0.38
Msx1P13297 Gm14659-201ENSMUST00000117667 843 ntBASIC12.69□□□□□ -0.38
Msx1P13297 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.69□□□□□ -0.38
Msx1P13297 Gm24196-201ENSMUST00000179161 110 ntBASIC12.69□□□□□ -0.38
Msx1P13297 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Msx1P13297 Gm38018-201ENSMUST00000195651 540 ntBASIC12.69□□□□□ -0.38
Msx1P13297 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Msx1P13297 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Msx1P13297 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.69□□□□□ -0.38
Msx1P13297 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Msx1P13297 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Msx1P13297 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.69□□□□□ -0.38
Msx1P13297 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msx1P13297 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msx1P13297 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msx1P13297 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msx1P13297 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msx1P13297 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.69□□□□□ -0.38
Msx1P13297 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Msx1P13297 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msx1P13297 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.68□□□□□ -0.38
Msx1P13297 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msx1P13297 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Msx1P13297 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msx1P13297 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msx1P13297 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.68□□□□□ -0.38
Msx1P13297 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Msx1P13297 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.68□□□□□ -0.38
Msx1P13297 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Msx1P13297 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Msx1P13297 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Msx1P13297 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msx1P13297 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Msx1P13297 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msx1P13297 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Msx1P13297 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Msx1P13297 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msx1P13297 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.68□□□□□ -0.38
Msx1P13297 Gm12384-201ENSMUST00000119228 919 ntBASIC12.68□□□□□ -0.38
Msx1P13297 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.68□□□□□ -0.38
Msx1P13297 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.68□□□□□ -0.38
Msx1P13297 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.68□□□□□ -0.38
Msx1P13297 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.68□□□□□ -0.38
Msx1P13297 Gm43316-201ENSMUST00000197252 1295 ntBASIC12.68□□□□□ -0.38
Msx1P13297 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.68□□□□□ -0.38
Msx1P13297 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Msx1P13297 Gm40466-201ENSMUST00000212174 422 ntBASIC12.68□□□□□ -0.38
Msx1P13297 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.68□□□□□ -0.38
Msx1P13297 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.68□□□□□ -0.38
Msx1P13297 CT009713.1-201ENSMUST00000224828 853 ntBASIC12.68□□□□□ -0.38
Msx1P13297 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msx1P13297 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msx1P13297 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msx1P13297 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.68□□□□□ -0.38
Msx1P13297 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Msx1P13297 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.68□□□□□ -0.38
Msx1P13297 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC12.68□□□□□ -0.38
Msx1P13297 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Msx1P13297 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msx1P13297 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msx1P13297 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.68□□□□□ -0.38
Msx1P13297 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.68□□□□□ -0.38
Msx1P13297 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msx1P13297 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msx1P13297 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msx1P13297 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Msx1P13297 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Msx1P13297 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Msx1P13297 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msx1P13297 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Msx1P13297 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.68□□□□□ -0.38
Msx1P13297 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Msx1P13297 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.67□□□□□ -0.38
Msx1P13297 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Msx1P13297 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.67□□□□□ -0.38
Msx1P13297 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Msx1P13297 Gm5187-201ENSMUST00000117317 991 ntBASIC12.67□□□□□ -0.38
Msx1P13297 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.67□□□□□ -0.38
Msx1P13297 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.67□□□□□ -0.38
Msx1P13297 Gm24644-201ENSMUST00000157114 139 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms