Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
Smim1P0C8K7 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Gm27742-201ENSMUST00000184667 60 ntBASIC9.08□□□□□ -0.96
Smim1P0C8K7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC9.08□□□□□ -0.96
Smim1P0C8K7 AC153889.1-201ENSMUST00000219257 330 ntBASIC9.08□□□□□ -0.96
Smim1P0C8K7 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Gm43984-201ENSMUST00000204572 2864 ntBASIC9.08□□□□□ -0.96
Smim1P0C8K7 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC9.08□□□□□ -0.96
Smim1P0C8K7 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.08□□□□□ -0.96
Smim1P0C8K7 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smim1P0C8K7 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smim1P0C8K7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC9.07□□□□□ -0.96
Smim1P0C8K7 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Gm44831-201ENSMUST00000208469 2989 ntBASIC9.07□□□□□ -0.96
Smim1P0C8K7 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Smim1P0C8K7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smim1P0C8K7 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Mir698-201ENSMUST00000102164 109 ntBASIC9.07□□□□□ -0.96
Smim1P0C8K7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC9.07□□□□□ -0.96
Smim1P0C8K7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Smim1P0C8K7 AA543401-201ENSMUST00000164248 1269 ntBASIC9.07□□□□□ -0.96
Smim1P0C8K7 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Gm7063-201ENSMUST00000186840 981 ntBASIC9.07□□□□□ -0.96
Smim1P0C8K7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Gm45167-201ENSMUST00000208007 322 ntBASIC9.07□□□□□ -0.96
Smim1P0C8K7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Smim1P0C8K7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smim1P0C8K7 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Smim1P0C8K7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms