Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC19.68■□□□□ 0.74
NclP09405 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NclP09405 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NclP09405 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
NclP09405 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NclP09405 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NclP09405 Gm37008-201ENSMUST00000195712 319 ntBASIC19.68■□□□□ 0.74
NclP09405 AC134335.2-201ENSMUST00000227660 440 ntBASIC19.68■□□□□ 0.74
NclP09405 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NclP09405 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC19.68■□□□□ 0.74
NclP09405 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NclP09405 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NclP09405 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NclP09405 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NclP09405 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
NclP09405 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NclP09405 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NclP09405 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NclP09405 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NclP09405 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NclP09405 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NclP09405 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NclP09405 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NclP09405 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NclP09405 Gm15198-201ENSMUST00000117283 177 ntBASIC19.67■□□□□ 0.74
NclP09405 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC19.67■□□□□ 0.74
NclP09405 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC19.67■□□□□ 0.74
NclP09405 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC19.67■□□□□ 0.74
NclP09405 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NclP09405 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
NclP09405 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NclP09405 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NclP09405 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC19.67■□□□□ 0.74
NclP09405 AC122305.4-201ENSMUST00000216159 1206 ntBASIC19.67■□□□□ 0.74
NclP09405 CU024892.2-201ENSMUST00000224608 832 ntBASIC19.67■□□□□ 0.74
NclP09405 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NclP09405 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NclP09405 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NclP09405 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NclP09405 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NclP09405 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NclP09405 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC19.67■□□□□ 0.74
NclP09405 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NclP09405 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NclP09405 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NclP09405 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NclP09405 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NclP09405 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NclP09405 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NclP09405 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NclP09405 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
NclP09405 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NclP09405 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NclP09405 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NclP09405 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NclP09405 Mir686-201ENSMUST00000102174 109 ntBASIC19.66■□□□□ 0.74
NclP09405 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
NclP09405 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
NclP09405 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC19.66■□□□□ 0.74
NclP09405 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC19.66■□□□□ 0.74
NclP09405 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NclP09405 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC19.66■□□□□ 0.74
NclP09405 Gm8801-201ENSMUST00000173255 1064 ntBASIC19.66■□□□□ 0.74
NclP09405 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NclP09405 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC19.66■□□□□ 0.74
NclP09405 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NclP09405 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NclP09405 Gm11661-201ENSMUST00000121761 1327 ntBASIC19.66■□□□□ 0.74
NclP09405 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
NclP09405 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NclP09405 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NclP09405 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NclP09405 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NclP09405 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
NclP09405 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NclP09405 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
NclP09405 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NclP09405 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NclP09405 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NclP09405 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NclP09405 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NclP09405 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NclP09405 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NclP09405 Gm38002-201ENSMUST00000193255 180 ntBASIC19.65■□□□□ 0.74
NclP09405 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NclP09405 Gm17823-201ENSMUST00000217830 1006 ntBASIC19.65■□□□□ 0.74
NclP09405 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC19.65■□□□□ 0.74
NclP09405 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NclP09405 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC19.65■□□□□ 0.74
NclP09405 Gm18222-201ENSMUST00000202416 1387 ntBASIC19.65■□□□□ 0.74
NclP09405 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NclP09405 Gm8706-201ENSMUST00000197372 1491 ntBASIC19.65■□□□□ 0.74
NclP09405 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NclP09405 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NclP09405 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NclP09405 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NclP09405 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NclP09405 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NclP09405 Gm22018-201ENSMUST00000104357 131 ntBASIC19.64■□□□□ 0.73
NclP09405 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms