Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.56□□□□□ -0.4
ApoeP08226 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Gm9229-201ENSMUST00000222777 126 ntBASIC12.56□□□□□ -0.4
ApoeP08226 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
ApoeP08226 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ApoeP08226 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
ApoeP08226 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.56□□□□□ -0.4
ApoeP08226 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
ApoeP08226 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
ApoeP08226 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ApoeP08226 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ApoeP08226 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ApoeP08226 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.55□□□□□ -0.4
ApoeP08226 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ApoeP08226 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ApoeP08226 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
ApoeP08226 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ApoeP08226 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ApoeP08226 Gm14494-201ENSMUST00000118786 435 ntBASIC12.55□□□□□ -0.4
ApoeP08226 Mir1897-201ENSMUST00000122581 272 ntBASIC12.55□□□□□ -0.4
ApoeP08226 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.55□□□□□ -0.4
ApoeP08226 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ApoeP08226 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.55□□□□□ -0.4
ApoeP08226 Mir6990-201ENSMUST00000183724 91 ntBASIC12.55□□□□□ -0.4
ApoeP08226 Gm43125-201ENSMUST00000201724 730 ntBASIC12.55□□□□□ -0.4
ApoeP08226 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.55□□□□□ -0.4
ApoeP08226 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.55□□□□□ -0.4
ApoeP08226 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ApoeP08226 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ApoeP08226 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ApoeP08226 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.55□□□□□ -0.4
ApoeP08226 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ApoeP08226 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ApoeP08226 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ApoeP08226 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ApoeP08226 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ApoeP08226 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ApoeP08226 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ApoeP08226 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ApoeP08226 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ApoeP08226 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.55□□□□□ -0.4
ApoeP08226 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ApoeP08226 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ApoeP08226 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ApoeP08226 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ApoeP08226 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ApoeP08226 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ApoeP08226 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
ApoeP08226 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
ApoeP08226 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
ApoeP08226 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ApoeP08226 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
ApoeP08226 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.54□□□□□ -0.4
ApoeP08226 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.54□□□□□ -0.4
ApoeP08226 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.54□□□□□ -0.4
ApoeP08226 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
ApoeP08226 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
ApoeP08226 Gm19931-201ENSMUST00000198920 368 ntBASIC12.54□□□□□ -0.4
ApoeP08226 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
ApoeP08226 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
ApoeP08226 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.54□□□□□ -0.4
ApoeP08226 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.54□□□□□ -0.4
ApoeP08226 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
ApoeP08226 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ApoeP08226 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms