Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.15□□□□□ -0.62
Hoxa3P02831 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.15□□□□□ -0.62
Hoxa3P02831 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 AY702102-202ENSMUST00000194651 1173 ntBASIC11.15□□□□□ -0.62
Hoxa3P02831 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Hoxa3P02831 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.15□□□□□ -0.62
Hoxa3P02831 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hoxa3P02831 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Hoxa3P02831 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hoxa3P02831 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.15□□□□□ -0.63
Hoxa3P02831 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hoxa3P02831 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hoxa3P02831 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hoxa3P02831 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hoxa3P02831 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.14□□□□□ -0.63
Hoxa3P02831 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Hoxa3P02831 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.14□□□□□ -0.63
Hoxa3P02831 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Hoxa3P02831 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.14□□□□□ -0.63
Hoxa3P02831 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.14□□□□□ -0.63
Hoxa3P02831 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.14□□□□□ -0.63
Hoxa3P02831 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.14□□□□□ -0.63
Hoxa3P02831 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.14□□□□□ -0.63
Hoxa3P02831 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.14□□□□□ -0.63
Hoxa3P02831 Gm12403-201ENSMUST00000121384 959 ntBASIC11.14□□□□□ -0.63
Hoxa3P02831 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.14□□□□□ -0.63
Hoxa3P02831 Gm24196-201ENSMUST00000179161 110 ntBASIC11.14□□□□□ -0.63
Hoxa3P02831 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.14□□□□□ -0.63
Hoxa3P02831 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.14□□□□□ -0.63
Hoxa3P02831 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.14□□□□□ -0.63
Hoxa3P02831 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.14□□□□□ -0.63
Hoxa3P02831 Gm38671-201ENSMUST00000200573 130 ntBASIC11.14□□□□□ -0.63
Hoxa3P02831 Gm42550-201ENSMUST00000201553 960 ntBASIC11.14□□□□□ -0.63
Hoxa3P02831 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Hoxa3P02831 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Hoxa3P02831 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Hoxa3P02831 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Hoxa3P02831 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Hoxa3P02831 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.14□□□□□ -0.63
Hoxa3P02831 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.14□□□□□ -0.63
Hoxa3P02831 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hoxa3P02831 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Hoxa3P02831 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.13□□□□□ -0.63
Hoxa3P02831 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Hoxa3P02831 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Hoxa3P02831 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms