Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
CopeO89079 Gm5312-201ENSMUST00000203728 547 ntBASIC13.7□□□□□ -0.22
CopeO89079 Gm18905-201ENSMUST00000205454 928 ntBASIC13.7□□□□□ -0.22
CopeO89079 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.7□□□□□ -0.22
CopeO89079 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopeO89079 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopeO89079 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopeO89079 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CopeO89079 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopeO89079 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopeO89079 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopeO89079 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopeO89079 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
CopeO89079 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopeO89079 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.7□□□□□ -0.22
CopeO89079 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopeO89079 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopeO89079 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopeO89079 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopeO89079 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.69□□□□□ -0.22
CopeO89079 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.69□□□□□ -0.22
CopeO89079 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.69□□□□□ -0.22
CopeO89079 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CopeO89079 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.69□□□□□ -0.22
CopeO89079 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.69□□□□□ -0.22
CopeO89079 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.69□□□□□ -0.22
CopeO89079 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.69□□□□□ -0.22
CopeO89079 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.69□□□□□ -0.22
CopeO89079 Gm15240-201ENSMUST00000118156 720 ntBASIC13.69□□□□□ -0.22
CopeO89079 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.69□□□□□ -0.22
CopeO89079 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.69□□□□□ -0.22
CopeO89079 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.69□□□□□ -0.22
CopeO89079 Gm24513-201ENSMUST00000174964 138 ntBASIC13.69□□□□□ -0.22
CopeO89079 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.69□□□□□ -0.22
CopeO89079 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 Gm17330-201ENSMUST00000221047 165 ntBASIC13.69□□□□□ -0.22
CopeO89079 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.69□□□□□ -0.22
CopeO89079 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CopeO89079 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CopeO89079 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CopeO89079 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CopeO89079 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopeO89079 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.68□□□□□ -0.22
CopeO89079 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
CopeO89079 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CopeO89079 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.68□□□□□ -0.22
CopeO89079 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.68□□□□□ -0.22
CopeO89079 Gm14822-201ENSMUST00000122247 291 ntBASIC13.68□□□□□ -0.22
CopeO89079 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.68□□□□□ -0.22
CopeO89079 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Gm27397-201ENSMUST00000184997 107 ntBASIC13.68□□□□□ -0.22
CopeO89079 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.68□□□□□ -0.22
CopeO89079 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CopeO89079 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CopeO89079 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.68□□□□□ -0.22
CopeO89079 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
CopeO89079 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CopeO89079 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.68□□□□□ -0.22
CopeO89079 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms