Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Apaf1O88879 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Apaf1O88879 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Apaf1O88879 AC139054.1-201ENSMUST00000226898 1598 ntBASIC17.23■□□□□ 0.35
Apaf1O88879 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Apaf1O88879 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Apaf1O88879 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Apaf1O88879 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Apaf1O88879 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Apaf1O88879 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Apaf1O88879 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC17.23■□□□□ 0.35
Apaf1O88879 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Apaf1O88879 Gm7553-201ENSMUST00000185805 1426 ntBASIC17.23■□□□□ 0.35
Apaf1O88879 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Apaf1O88879 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Apaf1O88879 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Apaf1O88879 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Apaf1O88879 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Apaf1O88879 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Apaf1O88879 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Apaf1O88879 Mir7221-201ENSMUST00000184009 72 ntBASIC17.23■□□□□ 0.35
Apaf1O88879 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Apaf1O88879 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Apaf1O88879 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Apaf1O88879 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Apaf1O88879 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Apaf1O88879 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Apaf1O88879 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Apaf1O88879 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
Apaf1O88879 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Apaf1O88879 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Apaf1O88879 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Apaf1O88879 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
Apaf1O88879 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17.22■□□□□ 0.35
Apaf1O88879 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Apaf1O88879 Gm14371-201ENSMUST00000138925 1518 ntBASIC17.22■□□□□ 0.35
Apaf1O88879 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Apaf1O88879 Dctn4-202ENSMUST00000223590 1530 ntBASIC17.22■□□□□ 0.35
Apaf1O88879 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Apaf1O88879 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Apaf1O88879 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Apaf1O88879 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Apaf1O88879 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Apaf1O88879 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Apaf1O88879 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Apaf1O88879 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Apaf1O88879 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Apaf1O88879 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Apaf1O88879 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Apaf1O88879 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Apaf1O88879 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Apaf1O88879 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC17.22■□□□□ 0.35
Apaf1O88879 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Apaf1O88879 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Apaf1O88879 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Apaf1O88879 AY702102-202ENSMUST00000194651 1173 ntBASIC17.22■□□□□ 0.35
Apaf1O88879 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Apaf1O88879 Gm44985-201ENSMUST00000206202 1016 ntBASIC17.22■□□□□ 0.35
Apaf1O88879 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC17.22■□□□□ 0.35
Apaf1O88879 AC134254.1-201ENSMUST00000221362 167 ntBASIC17.22■□□□□ 0.35
Apaf1O88879 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Apaf1O88879 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Apaf1O88879 Gm10339-203ENSMUST00000225409 1671 ntBASIC17.22■□□□□ 0.35
Apaf1O88879 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Apaf1O88879 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Apaf1O88879 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Apaf1O88879 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC17.21■□□□□ 0.35
Apaf1O88879 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Apaf1O88879 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Apaf1O88879 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Apaf1O88879 Gm9924-202ENSMUST00000192760 2311 ntBASIC17.21■□□□□ 0.35
Apaf1O88879 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Apaf1O88879 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Apaf1O88879 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Apaf1O88879 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Apaf1O88879 Gm38577-201ENSMUST00000221531 4545 ntBASIC17.21■□□□□ 0.35
Apaf1O88879 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Apaf1O88879 Gm12384-201ENSMUST00000119228 919 ntBASIC17.21■□□□□ 0.35
Apaf1O88879 Gm1335-201ENSMUST00000121653 386 ntBASIC17.21■□□□□ 0.35
Apaf1O88879 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Apaf1O88879 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC17.21■□□□□ 0.35
Apaf1O88879 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Apaf1O88879 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Apaf1O88879 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC17.21■□□□□ 0.35
Apaf1O88879 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Apaf1O88879 Gm8565-201ENSMUST00000183259 1014 ntBASIC17.21■□□□□ 0.35
Apaf1O88879 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Apaf1O88879 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Apaf1O88879 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC17.21■□□□□ 0.35
Apaf1O88879 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Apaf1O88879 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Apaf1O88879 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Apaf1O88879 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC17.21■□□□□ 0.35
Apaf1O88879 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Apaf1O88879 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Apaf1O88879 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Apaf1O88879 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Apaf1O88879 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Apaf1O88879 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Apaf1O88879 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms