Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Gm38297-201ENSMUST00000195122 1057 ntBASIC16.14■□□□□ 0.17
Cops6O88545 AC069562.3-201ENSMUST00000225387 587 ntBASIC16.14■□□□□ 0.17
Cops6O88545 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cops6O88545 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cops6O88545 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cops6O88545 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cops6O88545 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cops6O88545 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cops6O88545 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
Cops6O88545 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cops6O88545 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cops6O88545 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cops6O88545 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cops6O88545 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cops6O88545 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cops6O88545 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC16.13■□□□□ 0.17
Cops6O88545 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cops6O88545 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cops6O88545 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cops6O88545 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cops6O88545 Gm12502-201ENSMUST00000120197 444 ntBASIC16.13■□□□□ 0.17
Cops6O88545 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC16.13■□□□□ 0.17
Cops6O88545 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cops6O88545 Gm4959-201ENSMUST00000197271 1044 ntBASIC16.13■□□□□ 0.17
Cops6O88545 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cops6O88545 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cops6O88545 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cops6O88545 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.13■□□□□ 0.17
Cops6O88545 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cops6O88545 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.13■□□□□ 0.17
Cops6O88545 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cops6O88545 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cops6O88545 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cops6O88545 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cops6O88545 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cops6O88545 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cops6O88545 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cops6O88545 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cops6O88545 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.12■□□□□ 0.17
Cops6O88545 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.12■□□□□ 0.17
Cops6O88545 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cops6O88545 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC16.12■□□□□ 0.17
Cops6O88545 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cops6O88545 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cops6O88545 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cops6O88545 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cops6O88545 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC16.12■□□□□ 0.17
Cops6O88545 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC16.12■□□□□ 0.17
Cops6O88545 Gm13316-201ENSMUST00000140537 691 ntBASIC16.12■□□□□ 0.17
Cops6O88545 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cops6O88545 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cops6O88545 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC16.12■□□□□ 0.17
Cops6O88545 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC16.12■□□□□ 0.17
Cops6O88545 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC16.12■□□□□ 0.17
Cops6O88545 Gm18056-201ENSMUST00000207670 568 ntBASIC16.12■□□□□ 0.17
Cops6O88545 Gm18061-201ENSMUST00000208350 562 ntBASIC16.12■□□□□ 0.17
Cops6O88545 Gm18063-201ENSMUST00000208529 568 ntBASIC16.12■□□□□ 0.17
Cops6O88545 Gm18052-201ENSMUST00000208750 559 ntBASIC16.12■□□□□ 0.17
Cops6O88545 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC16.12■□□□□ 0.17
Cops6O88545 Morn2-202ENSMUST00000227729 656 ntBASIC16.12■□□□□ 0.17
Cops6O88545 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cops6O88545 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC16.12■□□□□ 0.17
Cops6O88545 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cops6O88545 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cops6O88545 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cops6O88545 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cops6O88545 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cops6O88545 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cops6O88545 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cops6O88545 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cops6O88545 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cops6O88545 Gm5466-201ENSMUST00000119395 1890 ntBASIC16.12■□□□□ 0.17
Cops6O88545 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cops6O88545 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cops6O88545 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.11■□□□□ 0.17
Cops6O88545 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.11■□□□□ 0.17
Cops6O88545 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.11■□□□□ 0.17
Cops6O88545 CT009713.10-201ENSMUST00000225013 1986 ntBASIC16.11■□□□□ 0.17
Cops6O88545 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cops6O88545 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cops6O88545 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cops6O88545 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cops6O88545 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.11■□□□□ 0.17
Cops6O88545 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cops6O88545 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cops6O88545 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cops6O88545 Gm15236-201ENSMUST00000117309 379 ntBASIC16.11■□□□□ 0.17
Cops6O88545 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cops6O88545 Gm26083-201ENSMUST00000157904 193 ntBASIC16.11■□□□□ 0.17
Cops6O88545 Gm22121-201ENSMUST00000175148 54 ntBASIC16.11■□□□□ 0.17
Cops6O88545 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cops6O88545 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cops6O88545 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cops6O88545 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cops6O88545 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cops6O88545 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cops6O88545 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cops6O88545 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cops6O88545 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cops6O88545 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms