Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cx3cl1O35188 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.49□□□□□ -0.41
Cx3cl1O35188 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.49□□□□□ -0.41
Cx3cl1O35188 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cx3cl1O35188 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.48□□□□□ -0.41
Cx3cl1O35188 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.48□□□□□ -0.41
Cx3cl1O35188 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.48□□□□□ -0.41
Cx3cl1O35188 Gm26315-201ENSMUST00000083890 321 ntBASIC12.48□□□□□ -0.41
Cx3cl1O35188 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.48□□□□□ -0.41
Cx3cl1O35188 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.48□□□□□ -0.41
Cx3cl1O35188 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cx3cl1O35188 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cx3cl1O35188 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.47□□□□□ -0.41
Cx3cl1O35188 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms