Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.86□□□□□ -0.51
Alx4O35137 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Alx4O35137 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.86□□□□□ -0.51
Alx4O35137 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Alx4O35137 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Alx4O35137 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Alx4O35137 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Alx4O35137 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Alx4O35137 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Alx4O35137 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Alx4O35137 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Alx4O35137 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Alx4O35137 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Alx4O35137 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.86□□□□□ -0.51
Alx4O35137 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Alx4O35137 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Alx4O35137 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Alx4O35137 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Alx4O35137 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Alx4O35137 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Alx4O35137 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Alx4O35137 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.85□□□□□ -0.51
Alx4O35137 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.85□□□□□ -0.51
Alx4O35137 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Alx4O35137 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.85□□□□□ -0.51
Alx4O35137 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Alx4O35137 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.85□□□□□ -0.51
Alx4O35137 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.85□□□□□ -0.51
Alx4O35137 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.85□□□□□ -0.51
Alx4O35137 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Alx4O35137 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Gm27321-201ENSMUST00000185021 205 ntBASIC11.85□□□□□ -0.51
Alx4O35137 Gm38144-201ENSMUST00000192790 465 ntBASIC11.85□□□□□ -0.51
Alx4O35137 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.85□□□□□ -0.51
Alx4O35137 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.85□□□□□ -0.51
Alx4O35137 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.85□□□□□ -0.51
Alx4O35137 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.85□□□□□ -0.51
Alx4O35137 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Gm5161-201ENSMUST00000075243 853 ntBASIC11.85□□□□□ -0.51
Alx4O35137 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Alx4O35137 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.85□□□□□ -0.51
Alx4O35137 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Alx4O35137 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Alx4O35137 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.84□□□□□ -0.51
Alx4O35137 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.84□□□□□ -0.51
Alx4O35137 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Alx4O35137 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.84□□□□□ -0.51
Alx4O35137 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.84□□□□□ -0.51
Alx4O35137 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.84□□□□□ -0.51
Alx4O35137 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.84□□□□□ -0.51
Alx4O35137 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Gm4995-201ENSMUST00000117247 432 ntBASIC11.84□□□□□ -0.51
Alx4O35137 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.84□□□□□ -0.51
Alx4O35137 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.84□□□□□ -0.51
Alx4O35137 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Alx4O35137 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.84□□□□□ -0.51
Alx4O35137 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Alx4O35137 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms