Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm28386-201ENSMUST00000189147 1849 ntBASIC20.03■□□□□ 0.8
Polr1aO35134 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Polr1aO35134 CU062626.3-201ENSMUST00000225522 1411 ntBASIC20.03■□□□□ 0.8
Polr1aO35134 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Polr1aO35134 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Polr1aO35134 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Polr1aO35134 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Polr1aO35134 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Polr1aO35134 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Polr1aO35134 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Polr1aO35134 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Polr1aO35134 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC20.02■□□□□ 0.8
Polr1aO35134 Gm24514-201ENSMUST00000174961 285 ntBASIC20.02■□□□□ 0.8
Polr1aO35134 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Polr1aO35134 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Polr1aO35134 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Polr1aO35134 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Polr1aO35134 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Polr1aO35134 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Polr1aO35134 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Polr1aO35134 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Polr1aO35134 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Polr1aO35134 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Polr1aO35134 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC20.02■□□□□ 0.79
Polr1aO35134 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Polr1aO35134 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Polr1aO35134 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Polr1aO35134 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Polr1aO35134 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Polr1aO35134 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Polr1aO35134 Gm8798-201ENSMUST00000211877 1661 ntBASIC20.01■□□□□ 0.79
Polr1aO35134 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC20.01■□□□□ 0.79
Polr1aO35134 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Polr1aO35134 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Polr1aO35134 Gm11405-201ENSMUST00000118689 1556 ntBASIC20.01■□□□□ 0.79
Polr1aO35134 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Polr1aO35134 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Polr1aO35134 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Polr1aO35134 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Polr1aO35134 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Polr1aO35134 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC20.01■□□□□ 0.79
Polr1aO35134 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Polr1aO35134 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC20.01■□□□□ 0.79
Polr1aO35134 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Polr1aO35134 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Polr1aO35134 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Polr1aO35134 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Polr1aO35134 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Polr1aO35134 Gm10710-201ENSMUST00000047876 3971 ntBASIC20.01■□□□□ 0.79
Polr1aO35134 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Polr1aO35134 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Polr1aO35134 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC20.01■□□□□ 0.79
Polr1aO35134 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Polr1aO35134 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC20.01■□□□□ 0.79
Polr1aO35134 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Polr1aO35134 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Polr1aO35134 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC20■□□□□ 0.79
Polr1aO35134 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC20■□□□□ 0.79
Polr1aO35134 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Polr1aO35134 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Polr1aO35134 Gm15703-201ENSMUST00000120250 880 ntBASIC20■□□□□ 0.79
Polr1aO35134 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC20■□□□□ 0.79
Polr1aO35134 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Polr1aO35134 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Polr1aO35134 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Polr1aO35134 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Polr1aO35134 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC20■□□□□ 0.79
Polr1aO35134 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Polr1aO35134 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Polr1aO35134 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Polr1aO35134 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Polr1aO35134 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Polr1aO35134 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Polr1aO35134 Gm5863-201ENSMUST00000121760 1008 ntBASIC19.99■□□□□ 0.79
Polr1aO35134 Gm27552-201ENSMUST00000183351 62 ntBASIC19.99■□□□□ 0.79
Polr1aO35134 Gm27844-201ENSMUST00000183613 62 ntBASIC19.99■□□□□ 0.79
Polr1aO35134 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Polr1aO35134 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Polr1aO35134 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Polr1aO35134 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Polr1aO35134 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Polr1aO35134 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Polr1aO35134 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Polr1aO35134 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Polr1aO35134 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Polr1aO35134 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Polr1aO35134 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC19.99■□□□□ 0.79
Polr1aO35134 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Polr1aO35134 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC19.99■□□□□ 0.79
Polr1aO35134 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Polr1aO35134 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Polr1aO35134 Gm11597-201ENSMUST00000121423 964 ntBASIC19.99■□□□□ 0.79
Polr1aO35134 Gm28882-201ENSMUST00000185504 314 ntBASIC19.99■□□□□ 0.79
Polr1aO35134 Gm7207-201ENSMUST00000211575 1067 ntBASIC19.99■□□□□ 0.79
Polr1aO35134 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Polr1aO35134 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Polr1aO35134 Gm21451-201ENSMUST00000111062 2775 ntBASIC19.99■□□□□ 0.79
Polr1aO35134 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC19.99■□□□□ 0.79
Polr1aO35134 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Polr1aO35134 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms