Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tcof1O08784 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tcof1O08784 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.53■□□□□ 0.08
Tcof1O08784 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Tcof1O08784 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tcof1O08784 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Tcof1O08784 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.53■□□□□ 0.08
Tcof1O08784 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Tcof1O08784 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.53■□□□□ 0.08
Tcof1O08784 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tcof1O08784 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Tcof1O08784 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tcof1O08784 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tcof1O08784 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tcof1O08784 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Tcof1O08784 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tcof1O08784 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tcof1O08784 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tcof1O08784 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tcof1O08784 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tcof1O08784 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tcof1O08784 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tcof1O08784 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.52■□□□□ 0.08
Tcof1O08784 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Tcof1O08784 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.52■□□□□ 0.08
Tcof1O08784 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.52■□□□□ 0.08
Tcof1O08784 Gm44069-201ENSMUST00000204898 506 ntBASIC15.52■□□□□ 0.08
Tcof1O08784 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.52■□□□□ 0.08
Tcof1O08784 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.52■□□□□ 0.08
Tcof1O08784 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tcof1O08784 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.52■□□□□ 0.08
Tcof1O08784 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Tcof1O08784 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tcof1O08784 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tcof1O08784 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tcof1O08784 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.52■□□□□ 0.07
Tcof1O08784 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tcof1O08784 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.52■□□□□ 0.07
Tcof1O08784 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tcof1O08784 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tcof1O08784 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tcof1O08784 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Tcof1O08784 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.07
Tcof1O08784 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Tcof1O08784 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.52■□□□□ 0.07
Tcof1O08784 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcof1O08784 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Tcof1O08784 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tcof1O08784 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcof1O08784 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.51■□□□□ 0.07
Tcof1O08784 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcof1O08784 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.51■□□□□ 0.07
Tcof1O08784 Gm11618-201ENSMUST00000117946 267 ntBASIC15.51■□□□□ 0.07
Tcof1O08784 Gm13369-201ENSMUST00000119442 987 ntBASIC15.51■□□□□ 0.07
Tcof1O08784 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.51■□□□□ 0.07
Tcof1O08784 Gm13123-201ENSMUST00000122173 492 ntBASIC15.51■□□□□ 0.07
Tcof1O08784 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
Tcof1O08784 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.51■□□□□ 0.07
Tcof1O08784 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
Tcof1O08784 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
Tcof1O08784 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.51■□□□□ 0.07
Tcof1O08784 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcof1O08784 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tcof1O08784 Gm10478-201ENSMUST00000084451 396 ntBASIC15.51■□□□□ 0.07
Tcof1O08784 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcof1O08784 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tcof1O08784 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tcof1O08784 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcof1O08784 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcof1O08784 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcof1O08784 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcof1O08784 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcof1O08784 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcof1O08784 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Tcof1O08784 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcof1O08784 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcof1O08784 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.51■□□□□ 0.07
Tcof1O08784 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Tcof1O08784 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcof1O08784 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.51■□□□□ 0.07
Tcof1O08784 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcof1O08784 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Tcof1O08784 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tcof1O08784 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tcof1O08784 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tcof1O08784 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tcof1O08784 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Tcof1O08784 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.5■□□□□ 0.07
Tcof1O08784 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Tcof1O08784 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.5■□□□□ 0.07
Tcof1O08784 Gm27731-201ENSMUST00000185192 107 ntBASIC15.5■□□□□ 0.07
Tcof1O08784 Gm42693-201ENSMUST00000196779 631 ntBASIC15.5■□□□□ 0.07
Tcof1O08784 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Tcof1O08784 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.5■□□□□ 0.07
Tcof1O08784 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.5■□□□□ 0.07
Tcof1O08784 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tcof1O08784 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tcof1O08784 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tcof1O08784 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tcof1O08784 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms