Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm45925-201ENSMUST00000218882 744 ntBASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcf11G3X9Z4 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Gm9924-202ENSMUST00000192760 2311 ntBASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcf11G3X9Z4 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Gm13394-201ENSMUST00000121658 1000 ntBASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Gm19994-201ENSMUST00000217086 586 ntBASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 AC113031.8-201ENSMUST00000227856 631 ntBASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Gm19863-201ENSMUST00000192480 2218 ntBASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Gm12058-201ENSMUST00000118614 437 ntBASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Gm9678-201ENSMUST00000198979 1149 ntBASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcf11G3X9Z4 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Pcf11G3X9Z4 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcf11G3X9Z4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcf11G3X9Z4 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcf11G3X9Z4 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcf11G3X9Z4 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcf11G3X9Z4 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcf11G3X9Z4 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcf11G3X9Z4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcf11G3X9Z4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Pcf11G3X9Z4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcf11G3X9Z4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcf11G3X9Z4 Mir874-201ENSMUST00000104769 76 ntBASIC19.73■□□□□ 0.75
Pcf11G3X9Z4 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcf11G3X9Z4 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC19.73■□□□□ 0.75
Pcf11G3X9Z4 Gm12217-201ENSMUST00000118858 696 ntBASIC19.73■□□□□ 0.75
Pcf11G3X9Z4 Gm8494-201ENSMUST00000178171 1233 ntBASIC19.73■□□□□ 0.75
Pcf11G3X9Z4 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcf11G3X9Z4 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
Pcf11G3X9Z4 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcf11G3X9Z4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms