Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Gm26464-201ENSMUST00000157094 305 ntBASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Gm43094-201ENSMUST00000196549 921 ntBASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh9F8VPK8 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Gm15376-201ENSMUST00000122258 783 ntBASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Gm19931-201ENSMUST00000198920 368 ntBASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Gm5279-201ENSMUST00000199575 745 ntBASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh9F8VPK8 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Gm11524-201ENSMUST00000119349 807 ntBASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Gm24694-201ENSMUST00000180054 110 ntBASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Gm27663-201ENSMUST00000184839 110 ntBASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Gm19078-201ENSMUST00000206311 727 ntBASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh9F8VPK8 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms