Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Gm19091-201ENSMUST00000208120 978 ntBASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Gm45398-201ENSMUST00000210561 165 ntBASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Gm45598-202ENSMUST00000210719 986 ntBASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Snora73b-201ENSMUST00000083419 205 ntBASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.29□□□□□ -0.28
Ccdc188F6WEU2 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Gm11978-201ENSMUST00000122315 466 ntBASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Gm28071-201ENSMUST00000190355 478 ntBASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Gm11470-201ENSMUST00000118868 1475 ntBASIC13.28□□□□□ -0.28
Ccdc188F6WEU2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc188F6WEU2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Ccdc188F6WEU2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc188F6WEU2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc188F6WEU2 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc188F6WEU2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc188F6WEU2 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc188F6WEU2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc188F6WEU2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Gm11941-201ENSMUST00000119904 610 ntBASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Ginm1-202ENSMUST00000065124 300 ntBASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc188F6WEU2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms