Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Syngap1F6SEU4 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.9□□□□□ -0.02
Syngap1F6SEU4 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Gm12203-201ENSMUST00000118235 598 ntBASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Gm12209-201ENSMUST00000120089 596 ntBASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syngap1F6SEU4 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syngap1F6SEU4 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Syngap1F6SEU4 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Gm5687-201ENSMUST00000118252 640 ntBASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Gm8194-201ENSMUST00000159783 859 ntBASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Itm2b-204ENSMUST00000228637 783 ntBASIC14.89□□□□□ -0.03
Syngap1F6SEU4 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Syngap1F6SEU4 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms