Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Gm14058-201ENSMUST00000116082 735 ntBASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Gm6771-201ENSMUST00000182716 1001 ntBASIC17.81■□□□□ 0.44
Zc3h13E9Q784 CT485607.1-201ENSMUST00000216100 85 ntBASIC17.81■□□□□ 0.44
Zc3h13E9Q784 AC169036.1-201ENSMUST00000227994 296 ntBASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Gm8325-201ENSMUST00000099086 453 ntBASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h13E9Q784 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Zc3h13E9Q784 Gm43962-201ENSMUST00000203898 190 ntBASIC17.81■□□□□ 0.44
Zc3h13E9Q784 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.81■□□□□ 0.44
Zc3h13E9Q784 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Gm23949-201ENSMUST00000104027 127 ntBASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC17.8■□□□□ 0.44
Zc3h13E9Q784 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Gm22138-201ENSMUST00000158748 128 ntBASIC17.8■□□□□ 0.44
Zc3h13E9Q784 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Aprt-ps-201ENSMUST00000212311 505 ntBASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Gm4797-201ENSMUST00000219075 1283 ntBASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Zc3h13E9Q784 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Gm44552-201ENSMUST00000205458 1247 ntBASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Gm9463-201ENSMUST00000206707 601 ntBASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Zc3h13E9Q784 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC17.78■□□□□ 0.44
Zc3h13E9Q784 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Zc3h13E9Q784 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Zc3h13E9Q784 Gm15881-201ENSMUST00000148792 942 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms