Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc85cE9Q6B2 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Ccdc85cE9Q6B2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc85cE9Q6B2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc85cE9Q6B2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc85cE9Q6B2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ccdc85cE9Q6B2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc85cE9Q6B2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc85cE9Q6B2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc85cE9Q6B2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc85cE9Q6B2 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC16.22■□□□□ 0.19
Ccdc85cE9Q6B2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc85cE9Q6B2 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc85cE9Q6B2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc85cE9Q6B2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc85cE9Q6B2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Gm37827-201ENSMUST00000194486 1542 ntBASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Gm7899-201ENSMUST00000192935 1897 ntBASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Gm37201-201ENSMUST00000191845 523 ntBASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Gm34023-201ENSMUST00000195539 217 ntBASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 AC166344.1-202ENSMUST00000224139 234 ntBASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 AC101945.2-201ENSMUST00000227886 1377 ntBASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
Ccdc85cE9Q6B2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Ccdc85cE9Q6B2 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.21■□□□□ 0.18
Ccdc85cE9Q6B2 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc85cE9Q6B2 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc85cE9Q6B2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ccdc85cE9Q6B2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Gm15515-201ENSMUST00000117827 822 ntBASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Gm11978-201ENSMUST00000122315 466 ntBASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Gm6254-201ENSMUST00000168178 1072 ntBASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc85cE9Q6B2 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc85cE9Q6B2 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccdc85cE9Q6B2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc85cE9Q6B2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc85cE9Q6B2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc85cE9Q6B2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ccdc85cE9Q6B2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc85cE9Q6B2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc85cE9Q6B2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc85cE9Q6B2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc85cE9Q6B2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc85cE9Q6B2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc85cE9Q6B2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc85cE9Q6B2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc85cE9Q6B2 Gm23949-201ENSMUST00000104027 127 ntBASIC16.19■□□□□ 0.18
Ccdc85cE9Q6B2 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc85cE9Q6B2 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Ccdc85cE9Q6B2 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Ccdc85cE9Q6B2 Gm13492-201ENSMUST00000119772 665 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms