Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd2E9PZM4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd2E9PZM4 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chd2E9PZM4 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd2E9PZM4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Chd2E9PZM4 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd2E9PZM4 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chd2E9PZM4 Gm11892-201ENSMUST00000117711 1202 ntBASIC17.75■□□□□ 0.43
Chd2E9PZM4 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC17.75■□□□□ 0.43
Chd2E9PZM4 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC17.75■□□□□ 0.43
Chd2E9PZM4 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chd2E9PZM4 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chd2E9PZM4 Gm45398-201ENSMUST00000210561 165 ntBASIC17.75■□□□□ 0.43
Chd2E9PZM4 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC17.75■□□□□ 0.43
Chd2E9PZM4 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd2E9PZM4 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Chd2E9PZM4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chd2E9PZM4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chd2E9PZM4 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chd2E9PZM4 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd2E9PZM4 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd2E9PZM4 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd2E9PZM4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chd2E9PZM4 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd2E9PZM4 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.74■□□□□ 0.43
Chd2E9PZM4 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd2E9PZM4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd2E9PZM4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd2E9PZM4 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd2E9PZM4 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Chd2E9PZM4 Gm13394-201ENSMUST00000121658 1000 ntBASIC17.74■□□□□ 0.43
Chd2E9PZM4 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC17.74■□□□□ 0.43
Chd2E9PZM4 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC17.74■□□□□ 0.43
Chd2E9PZM4 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Chd2E9PZM4 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC17.74■□□□□ 0.43
Chd2E9PZM4 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chd2E9PZM4 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chd2E9PZM4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd2E9PZM4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.74■□□□□ 0.43
Chd2E9PZM4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd2E9PZM4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd2E9PZM4 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Chd2E9PZM4 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC17.73■□□□□ 0.43
Chd2E9PZM4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC17.73■□□□□ 0.43
Chd2E9PZM4 Gm22133-201ENSMUST00000102082 109 ntBASIC17.73■□□□□ 0.43
Chd2E9PZM4 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chd2E9PZM4 Gm16397-201ENSMUST00000122201 494 ntBASIC17.73■□□□□ 0.43
Chd2E9PZM4 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd2E9PZM4 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Chd2E9PZM4 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chd2E9PZM4 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC17.73■□□□□ 0.43
Chd2E9PZM4 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC17.73■□□□□ 0.43
Chd2E9PZM4 Gm44980-201ENSMUST00000205826 314 ntBASIC17.73■□□□□ 0.43
Chd2E9PZM4 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd2E9PZM4 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chd2E9PZM4 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Chd2E9PZM4 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chd2E9PZM4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd2E9PZM4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd2E9PZM4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd2E9PZM4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd2E9PZM4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd2E9PZM4 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd2E9PZM4 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd2E9PZM4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chd2E9PZM4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chd2E9PZM4 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chd2E9PZM4 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd2E9PZM4 Mir1901-201ENSMUST00000122616 78 ntBASIC17.72■□□□□ 0.43
Chd2E9PZM4 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chd2E9PZM4 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC17.72■□□□□ 0.43
Chd2E9PZM4 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC17.72■□□□□ 0.43
Chd2E9PZM4 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd2E9PZM4 Gm5455-201ENSMUST00000058710 715 ntBASIC17.72■□□□□ 0.43
Chd2E9PZM4 Gm9785-201ENSMUST00000062642 1006 ntBASIC17.72■□□□□ 0.43
Chd2E9PZM4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Chd2E9PZM4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd2E9PZM4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd2E9PZM4 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd2E9PZM4 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd2E9PZM4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd2E9PZM4 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd2E9PZM4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chd2E9PZM4 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd2E9PZM4 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd2E9PZM4 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Chd2E9PZM4 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chd2E9PZM4 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC17.72■□□□□ 0.43
Chd2E9PZM4 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC17.72■□□□□ 0.43
Chd2E9PZM4 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd2E9PZM4 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chd2E9PZM4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd2E9PZM4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd2E9PZM4 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chd2E9PZM4 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd2E9PZM4 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd2E9PZM4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chd2E9PZM4 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC17.71■□□□□ 0.43
Chd2E9PZM4 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chd2E9PZM4 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms