Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdh17E9PXF0 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Gm23931-201ENSMUST00000103842 109 ntBASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Gm27514-201ENSMUST00000183692 110 ntBASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdh17E9PXF0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh17E9PXF0 Gm5370-201ENSMUST00000187187 574 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms