Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hfm1D3Z4R1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hfm1D3Z4R1 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hfm1D3Z4R1 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hfm1D3Z4R1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hfm1D3Z4R1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hfm1D3Z4R1 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Hfm1D3Z4R1 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC18.32■□□□□ 0.52
Hfm1D3Z4R1 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hfm1D3Z4R1 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hfm1D3Z4R1 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hfm1D3Z4R1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hfm1D3Z4R1 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC18.31■□□□□ 0.52
Hfm1D3Z4R1 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hfm1D3Z4R1 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC18.31■□□□□ 0.52
Hfm1D3Z4R1 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hfm1D3Z4R1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hfm1D3Z4R1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hfm1D3Z4R1 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hfm1D3Z4R1 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC18.31■□□□□ 0.52
Hfm1D3Z4R1 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Hfm1D3Z4R1 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hfm1D3Z4R1 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC18.31■□□□□ 0.52
Hfm1D3Z4R1 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hfm1D3Z4R1 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC18.31■□□□□ 0.52
Hfm1D3Z4R1 Ntng1-201ENSMUST00000051253 327 ntBASIC18.31■□□□□ 0.52
Hfm1D3Z4R1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hfm1D3Z4R1 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Hfm1D3Z4R1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Gm19353-201ENSMUST00000184561 445 ntBASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hfm1D3Z4R1 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Gm21451-201ENSMUST00000111062 2775 ntBASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Gm11667-201ENSMUST00000119828 486 ntBASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Gm5616-201ENSMUST00000165252 384 ntBASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Gm8741-201ENSMUST00000174736 384 ntBASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hfm1D3Z4R1 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Gm9279-201ENSMUST00000223175 1606 ntBASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Gm28882-201ENSMUST00000185504 314 ntBASIC18.28■□□□□ 0.52
Hfm1D3Z4R1 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms