Protein–RNA interactions for Protein: B4XVP9

Phf11c, PHD finger protein 11C, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf11cB4XVP9 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Gm26308-201ENSMUST00000157768 69 ntBASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Gm6736-201ENSMUST00000166583 948 ntBASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Gm3436-201ENSMUST00000179930 840 ntBASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Phf11cB4XVP9 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Phf11cB4XVP9 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Phf11cB4XVP9 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Gm15240-201ENSMUST00000118156 720 ntBASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Gm27430-201ENSMUST00000184585 107 ntBASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Gm44333-201ENSMUST00000197168 107 ntBASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.58□□□□□ -0.4
Phf11cB4XVP9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.57□□□□□ -0.4
Phf11cB4XVP9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Gm4875-201ENSMUST00000118257 786 ntBASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Gm13223-201ENSMUST00000118609 747 ntBASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Gm27321-201ENSMUST00000185021 205 ntBASIC12.57□□□□□ -0.4
Phf11cB4XVP9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.57□□□□□ -0.4
Phf11cB4XVP9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Phf11cB4XVP9 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms