Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Rmrp-201ENSMUST00000157463 271 ntBASIC16.74■□□□□ 0.27
Scn7aB1AYL1 Gm43962-201ENSMUST00000203898 190 ntBASIC16.74■□□□□ 0.27
Scn7aB1AYL1 Gm5369-201ENSMUST00000217499 588 ntBASIC16.74■□□□□ 0.27
Scn7aB1AYL1 AL732506.1-201ENSMUST00000226420 281 ntBASIC16.74■□□□□ 0.27
Scn7aB1AYL1 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn7aB1AYL1 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn7aB1AYL1 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn7aB1AYL1 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn7aB1AYL1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 CT025694.1-201ENSMUST00000226188 934 ntBASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Gm14267-206ENSMUST00000226870 1209 ntBASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 AC122314.1-201ENSMUST00000223056 2239 ntBASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Scn7aB1AYL1 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Gm17812-201ENSMUST00000204935 318 ntBASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Gm44651-201ENSMUST00000207343 372 ntBASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Gm18393-201ENSMUST00000208349 1131 ntBASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Dhrs4-202ENSMUST00000226168 828 ntBASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Gm13996-201ENSMUST00000118456 430 ntBASIC16.72■□□□□ 0.27
Scn7aB1AYL1 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 AC159205.5-202ENSMUST00000224849 386 ntBASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Gm10312-201ENSMUST00000078515 489 ntBASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Gm13812-201ENSMUST00000118061 1347 ntBASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Gm13810-201ENSMUST00000118584 1347 ntBASIC16.72■□□□□ 0.27
Scn7aB1AYL1 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn7aB1AYL1 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn7aB1AYL1 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn7aB1AYL1 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scn7aB1AYL1 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Scn7aB1AYL1 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn7aB1AYL1 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn7aB1AYL1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn7aB1AYL1 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn7aB1AYL1 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC16.71■□□□□ 0.27
Scn7aB1AYL1 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn7aB1AYL1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn7aB1AYL1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.71■□□□□ 0.27
Scn7aB1AYL1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Scn7aB1AYL1 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn7aB1AYL1 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms