Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1aA2APX8 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Scn1aA2APX8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1aA2APX8 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.84□□□□□ -0.19
Scn1aA2APX8 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Gm25927-201ENSMUST00000175058 117 ntBASIC13.84□□□□□ -0.19
Scn1aA2APX8 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.84□□□□□ -0.19
Scn1aA2APX8 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.84□□□□□ -0.19
Scn1aA2APX8 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.84□□□□□ -0.19
Scn1aA2APX8 Gm27572-201ENSMUST00000183702 255 ntBASIC13.84□□□□□ -0.19
Scn1aA2APX8 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.84□□□□□ -0.19
Scn1aA2APX8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn1aA2APX8 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Scn1aA2APX8 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scn1aA2APX8 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scn1aA2APX8 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Scn1aA2APX8 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scn1aA2APX8 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.83□□□□□ -0.19
Scn1aA2APX8 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Scn1aA2APX8 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1aA2APX8 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Gm19163-201ENSMUST00000223313 780 ntBASIC13.83□□□□□ -0.2
Scn1aA2APX8 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.83□□□□□ -0.2
Scn1aA2APX8 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1aA2APX8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.83□□□□□ -0.2
Scn1aA2APX8 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.83□□□□□ -0.2
Scn1aA2APX8 Gm14723-201ENSMUST00000118686 215 ntBASIC13.83□□□□□ -0.2
Scn1aA2APX8 Gm11591-201ENSMUST00000120063 702 ntBASIC13.83□□□□□ -0.2
Scn1aA2APX8 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1aA2APX8 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Scn1aA2APX8 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.82□□□□□ -0.2
Scn1aA2APX8 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.82□□□□□ -0.2
Scn1aA2APX8 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scn1aA2APX8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms