Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Gm38144-201ENSMUST00000192790 465 ntBASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Gm43094-201ENSMUST00000196549 921 ntBASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc112A0AUP1 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Gm27194-201ENSMUST00000175753 2936 ntBASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc112A0AUP1 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc112A0AUP1 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms