Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.68□□□□□ -0.22
Speer3W4VSP1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Speer3W4VSP1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Speer3W4VSP1 Gm28877-201ENSMUST00000191349 604 ntBASIC13.68□□□□□ -0.22
Speer3W4VSP1 Gm6649-201ENSMUST00000199743 1165 ntBASIC13.68□□□□□ -0.22
Speer3W4VSP1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.68□□□□□ -0.22
Speer3W4VSP1 Gm45071-201ENSMUST00000205353 571 ntBASIC13.68□□□□□ -0.22
Speer3W4VSP1 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC13.68□□□□□ -0.22
Speer3W4VSP1 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Speer3W4VSP1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Speer3W4VSP1 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Speer3W4VSP1 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Speer3W4VSP1 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Speer3W4VSP1 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Speer3W4VSP1 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Speer3W4VSP1 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Speer3W4VSP1 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Gm15653-201ENSMUST00000119247 907 ntBASIC13.67□□□□□ -0.22
Speer3W4VSP1 Gm15693-201ENSMUST00000120470 637 ntBASIC13.67□□□□□ -0.22
Speer3W4VSP1 Mir1897-201ENSMUST00000122581 272 ntBASIC13.67□□□□□ -0.22
Speer3W4VSP1 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Speer3W4VSP1 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Speer3W4VSP1 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Speer3W4VSP1 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Gm17837-201ENSMUST00000186435 985 ntBASIC13.66□□□□□ -0.22
Speer3W4VSP1 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC13.66□□□□□ -0.22
Speer3W4VSP1 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Gm18377-201ENSMUST00000215141 607 ntBASIC13.66□□□□□ -0.22
Speer3W4VSP1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.66□□□□□ -0.22
Speer3W4VSP1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Speer3W4VSP1 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Speer3W4VSP1 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Speer3W4VSP1 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Speer3W4VSP1 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Speer3W4VSP1 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Speer3W4VSP1 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
Speer3W4VSP1 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Speer3W4VSP1 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Speer3W4VSP1 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Speer3W4VSP1 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Speer3W4VSP1 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Speer3W4VSP1 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Speer3W4VSP1 Gm5133-201ENSMUST00000118940 1255 ntBASIC13.65□□□□□ -0.22
Speer3W4VSP1 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Speer3W4VSP1 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms