Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12□□□□□ -0.49
H2afb3S4R1G7 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12□□□□□ -0.49
H2afb3S4R1G7 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12□□□□□ -0.49
H2afb3S4R1G7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12□□□□□ -0.49
H2afb3S4R1G7 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
H2afb3S4R1G7 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Gm38294-201ENSMUST00000192831 381 ntBASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
H2afb3S4R1G7 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Gm15240-201ENSMUST00000118156 720 ntBASIC11.98□□□□□ -0.49
H2afb3S4R1G7 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.98□□□□□ -0.49
H2afb3S4R1G7 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms