Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
CcsQ9WU84 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
CcsQ9WU84 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.35□□□□□ -0.75
CcsQ9WU84 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Gm6018-201ENSMUST00000216090 1306 ntBASIC10.35□□□□□ -0.75
CcsQ9WU84 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
CcsQ9WU84 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.35□□□□□ -0.75
CcsQ9WU84 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
CcsQ9WU84 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.35□□□□□ -0.75
CcsQ9WU84 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Mir449b-201ENSMUST00000104833 80 ntBASIC10.35□□□□□ -0.75
CcsQ9WU84 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.35□□□□□ -0.75
CcsQ9WU84 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Gm13616-201ENSMUST00000120600 222 ntBASIC10.35□□□□□ -0.75
CcsQ9WU84 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC10.35□□□□□ -0.75
CcsQ9WU84 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC10.35□□□□□ -0.75
CcsQ9WU84 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
CcsQ9WU84 Gm24158-201ENSMUST00000175263 71 ntBASIC10.35□□□□□ -0.75
CcsQ9WU84 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC10.35□□□□□ -0.75
CcsQ9WU84 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC10.35□□□□□ -0.75
CcsQ9WU84 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
CcsQ9WU84 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
CcsQ9WU84 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
CcsQ9WU84 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
CcsQ9WU84 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
CcsQ9WU84 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
CcsQ9WU84 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
CcsQ9WU84 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
CcsQ9WU84 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
CcsQ9WU84 Gm38225-201ENSMUST00000194001 393 ntBASIC10.34□□□□□ -0.75
CcsQ9WU84 Gm7774-201ENSMUST00000200064 533 ntBASIC10.34□□□□□ -0.75
CcsQ9WU84 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC10.34□□□□□ -0.75
CcsQ9WU84 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
CcsQ9WU84 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
CcsQ9WU84 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms