Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.66□□□□□ -0.06
Prpf40aQ9R1C7 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf40aQ9R1C7 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Prpf40aQ9R1C7 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Mir6392-201ENSMUST00000184924 108 ntBASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Gm45668-201ENSMUST00000211271 493 ntBASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Prpf40aQ9R1C7 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Gm18307-201ENSMUST00000206864 949 ntBASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Prpf40aQ9R1C7 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf40aQ9R1C7 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Prpf40aQ9R1C7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf40aQ9R1C7 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf40aQ9R1C7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf40aQ9R1C7 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf40aQ9R1C7 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf40aQ9R1C7 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Prpf40aQ9R1C7 Gm15376-201ENSMUST00000122258 783 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms