Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Cdh17Q9R100 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Mir6956-201ENSMUST00000183598 62 ntBASIC12.97□□□□□ -0.33
Cdh17Q9R100 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.97□□□□□ -0.33
Cdh17Q9R100 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.97□□□□□ -0.33
Cdh17Q9R100 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Cdh17Q9R100 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdh17Q9R100 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh17Q9R100 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh17Q9R100 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.96□□□□□ -0.33
Cdh17Q9R100 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh17Q9R100 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cdh17Q9R100 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh17Q9R100 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh17Q9R100 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh17Q9R100 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh17Q9R100 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cdh17Q9R100 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh17Q9R100 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.96□□□□□ -0.33
Cdh17Q9R100 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh17Q9R100 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh17Q9R100 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh17Q9R100 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.96□□□□□ -0.33
Cdh17Q9R100 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cdh17Q9R100 Mir7684-201ENSMUST00000183858 60 ntBASIC12.96□□□□□ -0.33
Cdh17Q9R100 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh17Q9R100 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.96□□□□□ -0.33
Cdh17Q9R100 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.96□□□□□ -0.33
Cdh17Q9R100 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.96□□□□□ -0.33
Cdh17Q9R100 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.96□□□□□ -0.33
Cdh17Q9R100 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cdh17Q9R100 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh17Q9R100 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.96□□□□□ -0.33
Cdh17Q9R100 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh17Q9R100 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.96□□□□□ -0.33
Cdh17Q9R100 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdh17Q9R100 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.96□□□□□ -0.33
Cdh17Q9R100 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdh17Q9R100 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdh17Q9R100 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Cdh17Q9R100 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdh17Q9R100 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdh17Q9R100 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cdh17Q9R100 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdh17Q9R100 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cdh17Q9R100 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdh17Q9R100 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.95□□□□□ -0.34
Cdh17Q9R100 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Gm12151-201ENSMUST00000121374 290 ntBASIC12.95□□□□□ -0.34
Cdh17Q9R100 Gm14719-201ENSMUST00000121891 340 ntBASIC12.95□□□□□ -0.34
Cdh17Q9R100 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.95□□□□□ -0.34
Cdh17Q9R100 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Gm24694-201ENSMUST00000180054 110 ntBASIC12.95□□□□□ -0.34
Cdh17Q9R100 Gm27663-201ENSMUST00000184839 110 ntBASIC12.95□□□□□ -0.34
Cdh17Q9R100 Gm19931-201ENSMUST00000198920 368 ntBASIC12.95□□□□□ -0.34
Cdh17Q9R100 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.95□□□□□ -0.34
Cdh17Q9R100 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdh17Q9R100 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms