Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 Gm15678-201ENSMUST00000117573 960 ntBASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Clcn2Q9R0A1 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Gm6912-201ENSMUST00000117218 544 ntBASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Gm7063-201ENSMUST00000186840 981 ntBASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clcn2Q9R0A1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Clcn2Q9R0A1 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Clcn2Q9R0A1 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Clcn2Q9R0A1 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms