Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup50Q9JIH2 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup50Q9JIH2 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup50Q9JIH2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup50Q9JIH2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup50Q9JIH2 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nup50Q9JIH2 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup50Q9JIH2 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.05□□□□□ -0.16
Nup50Q9JIH2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nup50Q9JIH2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nup50Q9JIH2 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Gm19931-201ENSMUST00000198920 368 ntBASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Gm5867-201ENSMUST00000063197 592 ntBASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup50Q9JIH2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Gm5354-201ENSMUST00000182417 973 ntBASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.03□□□□□ -0.16
Nup50Q9JIH2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.03□□□□□ -0.16
Nup50Q9JIH2 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nup50Q9JIH2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup50Q9JIH2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup50Q9JIH2 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nup50Q9JIH2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Nup50Q9JIH2 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup50Q9JIH2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup50Q9JIH2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nup50Q9JIH2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup50Q9JIH2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup50Q9JIH2 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup50Q9JIH2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup50Q9JIH2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.02□□□□□ -0.16
Nup50Q9JIH2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nup50Q9JIH2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nup50Q9JIH2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup50Q9JIH2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Nup50Q9JIH2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.02□□□□□ -0.16
Nup50Q9JIH2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup50Q9JIH2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.02□□□□□ -0.17
Nup50Q9JIH2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nup50Q9JIH2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Nup50Q9JIH2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.02□□□□□ -0.17
Nup50Q9JIH2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms