Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Gm17271-201ENSMUST00000165535 355 ntBASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Rpph1-201ENSMUST00000175096 319 ntBASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ube4bQ9ES00 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Gm5479-201ENSMUST00000160578 435 ntBASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ube4bQ9ES00 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ube4bQ9ES00 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.73□□□□□ -0.37
Ube4bQ9ES00 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ube4bQ9ES00 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Ube4bQ9ES00 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ube4bQ9ES00 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ube4bQ9ES00 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ube4bQ9ES00 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ube4bQ9ES00 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms