Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Gm44405-201ENSMUST00000198952 126 ntBASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx2-4Q9EQM3 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Gm13875-201ENSMUST00000120162 282 ntBASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Gm8885-201ENSMUST00000189382 598 ntBASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nkx2-4Q9EQM3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Nkx2-4Q9EQM3 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms