Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cpsf1Q9EPU4 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cpsf1Q9EPU4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 Gm44401-201ENSMUST00000204462 2375 ntBASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 Gm8738-201ENSMUST00000172606 329 ntBASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 Gm10710-201ENSMUST00000047876 3971 ntBASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpsf1Q9EPU4 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf1Q9EPU4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf1Q9EPU4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf1Q9EPU4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf1Q9EPU4 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC18.12■□□□□ 0.49
Cpsf1Q9EPU4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf1Q9EPU4 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf1Q9EPU4 Gm24255-201ENSMUST00000104481 128 ntBASIC18.12■□□□□ 0.49
Cpsf1Q9EPU4 Gm11964-201ENSMUST00000120982 444 ntBASIC18.12■□□□□ 0.49
Cpsf1Q9EPU4 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf1Q9EPU4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC18.12■□□□□ 0.49
Cpsf1Q9EPU4 Gm4959-201ENSMUST00000197271 1044 ntBASIC18.12■□□□□ 0.49
Cpsf1Q9EPU4 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cpsf1Q9EPU4 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC18.12■□□□□ 0.49
Cpsf1Q9EPU4 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cpsf1Q9EPU4 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cpsf1Q9EPU4 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Cpsf1Q9EPU4 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
Cpsf1Q9EPU4 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Gm5637-201ENSMUST00000153890 1119 ntBASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 AC132317.1-201ENSMUST00000227227 962 ntBASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Matn2-206ENSMUST00000228570 2798 ntBASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cpsf1Q9EPU4 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Gm4986-201ENSMUST00000119731 549 ntBASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Gm13492-201ENSMUST00000119772 665 ntBASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Gm13813-201ENSMUST00000120998 787 ntBASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Gm44851-201ENSMUST00000205735 2309 ntBASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpsf1Q9EPU4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms