Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hmgn3Q9DCB1 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Rpph1-201ENSMUST00000175096 319 ntBASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Gm44492-201ENSMUST00000197012 141 ntBASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hmgn3Q9DCB1 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.46□□□□□ -0.42
Hmgn3Q9DCB1 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmgn3Q9DCB1 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Hmgn3Q9DCB1 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmgn3Q9DCB1 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmgn3Q9DCB1 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmgn3Q9DCB1 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmgn3Q9DCB1 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Hmgn3Q9DCB1 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmgn3Q9DCB1 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Hmgn3Q9DCB1 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hmgn3Q9DCB1 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmgn3Q9DCB1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms