Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hmg20aQ9DC33 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Gm12350-201ENSMUST00000121208 462 ntBASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Gm2272-201ENSMUST00000194903 582 ntBASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Gm18195-201ENSMUST00000207604 706 ntBASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmg20aQ9DC33 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Gm5177-201ENSMUST00000183092 997 ntBASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Thap2-203ENSMUST00000218989 527 ntBASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmg20aQ9DC33 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmg20aQ9DC33 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmg20aQ9DC33 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmg20aQ9DC33 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms