Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gtf3c6Q9D8P7 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.33□□□□□ -0.11
Gtf3c6Q9D8P7 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gtf3c6Q9D8P7 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gtf3c6Q9D8P7 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Mir874-201ENSMUST00000104769 76 ntBASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gtf3c6Q9D8P7 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Gm14057-201ENSMUST00000120631 482 ntBASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Mir7221-201ENSMUST00000184009 72 ntBASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Gm42612-201ENSMUST00000197986 623 ntBASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Gm43170-201ENSMUST00000199827 612 ntBASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Gm45841-201ENSMUST00000207700 164 ntBASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Gm37014-201ENSMUST00000194723 2253 ntBASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Gm37447-201ENSMUST00000195625 2928 ntBASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gtf3c6Q9D8P7 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gtf3c6Q9D8P7 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms