Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Gm6983-201ENSMUST00000214912 628 ntBASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chmp4bQ9D8B3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Gm6161-201ENSMUST00000121942 1102 ntBASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Gm6254-201ENSMUST00000168178 1072 ntBASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Gm6153-201ENSMUST00000172004 1058 ntBASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Mir6392-201ENSMUST00000184924 108 ntBASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Gm29608-201ENSMUST00000190444 463 ntBASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Gm5641-202ENSMUST00000198699 1080 ntBASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Gm18624-201ENSMUST00000220966 658 ntBASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 CT573086.1-201ENSMUST00000227202 1074 ntBASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Gm15823-201ENSMUST00000064305 670 ntBASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Gm5939-201ENSMUST00000119613 2874 ntBASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chmp4bQ9D8B3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Gm12859-201ENSMUST00000117834 427 ntBASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chmp4bQ9D8B3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms