Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Chmp5Q9D7S9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Gm11594-201ENSMUST00000122313 162 ntBASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Gm24513-201ENSMUST00000174964 138 ntBASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Gm25948-201ENSMUST00000175334 112 ntBASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Gm27397-201ENSMUST00000184997 107 ntBASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp5Q9D7S9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Gm18905-201ENSMUST00000205454 928 ntBASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Rnf17-202ENSMUST00000223627 2077 ntBASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp5Q9D7S9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Gm27772-201ENSMUST00000184900 187 ntBASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Gm44344-201ENSMUST00000200287 129 ntBASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Gm17330-201ENSMUST00000221047 165 ntBASIC16.6■□□□□ 0.25
Chmp5Q9D7S9 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms