Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Chmp4cQ9D7F7 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Gm24420-201ENSMUST00000176676 59 ntBASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Gm27306-201ENSMUST00000183970 107 ntBASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Gm29667-201ENSMUST00000190817 490 ntBASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Gm18041-201ENSMUST00000218210 618 ntBASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Chmp4cQ9D7F7 Ntrk2-204ENSMUST00000224259 3049 ntBASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Chmp4cQ9D7F7 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms