Protein–RNA interactions for Protein: Q9D6F9

Tubb4a, Tubulin beta-4A chain, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb4aQ9D6F9 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tubb4aQ9D6F9 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Tubb4aQ9D6F9 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.34□□□□□ -0.11
Tubb4aQ9D6F9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Tubb4aQ9D6F9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Tubb4aQ9D6F9 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tubb4aQ9D6F9 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.33□□□□□ -0.11
Tubb4aQ9D6F9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tubb4aQ9D6F9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tubb4aQ9D6F9 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tubb4aQ9D6F9 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Matn2-203ENSMUST00000226766 3252 ntBASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Gm44124-201ENSMUST00000204159 472 ntBASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tubb4aQ9D6F9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Gm15427-201ENSMUST00000117288 531 ntBASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Gm24420-201ENSMUST00000176676 59 ntBASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tubb4aQ9D6F9 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb4aQ9D6F9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb4aQ9D6F9 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb4aQ9D6F9 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb4aQ9D6F9 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tubb4aQ9D6F9 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb4aQ9D6F9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb4aQ9D6F9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Tubb4aQ9D6F9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.31□□□□□ -0.12
Tubb4aQ9D6F9 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb4aQ9D6F9 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb4aQ9D6F9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb4aQ9D6F9 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Tubb4aQ9D6F9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.31□□□□□ -0.12
Tubb4aQ9D6F9 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Tubb4aQ9D6F9 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.31□□□□□ -0.12
Tubb4aQ9D6F9 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb4aQ9D6F9 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.31□□□□□ -0.12
Tubb4aQ9D6F9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Tubb4aQ9D6F9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.31□□□□□ -0.12
Tubb4aQ9D6F9 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tubb4aQ9D6F9 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Tubb4aQ9D6F9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms