Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Stag1Q9D3E6 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.8■□□□□ 0.12
Stag1Q9D3E6 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Gm13342-201ENSMUST00000121055 207 ntBASIC15.8■□□□□ 0.12
Stag1Q9D3E6 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Gm19163-201ENSMUST00000223313 780 ntBASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Stag1Q9D3E6 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Gm26185-201ENSMUST00000157692 266 ntBASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Stag1Q9D3E6 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Stag1Q9D3E6 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Gm7584-201ENSMUST00000175829 940 ntBASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Gm29396-201ENSMUST00000185659 716 ntBASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Gm28693-202ENSMUST00000190758 331 ntBASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Gm7783-201ENSMUST00000204795 781 ntBASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Gm4768-201ENSMUST00000206199 686 ntBASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Gm9368-201ENSMUST00000219348 831 ntBASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Stag1Q9D3E6 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Stag1Q9D3E6 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms