Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim13Q9CYB0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Gm9824-201ENSMUST00000178707 561 ntBASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Gm18766-201ENSMUST00000189811 808 ntBASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Dupd1-202ENSMUST00000224735 548 ntBASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim13Q9CYB0 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Gm43575-201ENSMUST00000196420 516 ntBASIC12.28□□□□□ -0.44
Trim13Q9CYB0 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim13Q9CYB0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim13Q9CYB0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim13Q9CYB0 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.27□□□□□ -0.44
Trim13Q9CYB0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.27□□□□□ -0.44
Trim13Q9CYB0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim13Q9CYB0 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms