Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Pck2-205ENSMUST00000226352 2784 ntBASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssu72Q9CY97 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ssu72Q9CY97 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ssu72Q9CY97 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ssu72Q9CY97 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ssu72Q9CY97 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ssu72Q9CY97 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Ssu72Q9CY97 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ssu72Q9CY97 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ssu72Q9CY97 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ssu72Q9CY97 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ssu72Q9CY97 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ssu72Q9CY97 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ssu72Q9CY97 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ssu72Q9CY97 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ssu72Q9CY97 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Gm25144-201ENSMUST00000179561 110 ntBASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Gm25352-201ENSMUST00000179815 110 ntBASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Gm27622-201ENSMUST00000183779 60 ntBASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Gm10253-201ENSMUST00000194270 940 ntBASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Gm44335-201ENSMUST00000196879 141 ntBASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Gm44297-201ENSMUST00000198304 141 ntBASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Gm44346-201ENSMUST00000198851 141 ntBASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssu72Q9CY97 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Gm6415-201ENSMUST00000118488 348 ntBASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Gm3436-201ENSMUST00000179930 840 ntBASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ssu72Q9CY97 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.18□□□□□ -0.3
Ssu72Q9CY97 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms