Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Ddx47Q9CWX9 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx47Q9CWX9 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx47Q9CWX9 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.67□□□□□ -0.22
Ddx47Q9CWX9 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.67□□□□□ -0.22
Ddx47Q9CWX9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx47Q9CWX9 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.67□□□□□ -0.22
Ddx47Q9CWX9 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.67□□□□□ -0.22
Ddx47Q9CWX9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Gm12428-201ENSMUST00000119844 727 ntBASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Gm27525-201ENSMUST00000184465 107 ntBASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx47Q9CWX9 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Gm13385-201ENSMUST00000121089 220 ntBASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Gm18049-201ENSMUST00000208909 581 ntBASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Dupd1-202ENSMUST00000224735 548 ntBASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx47Q9CWX9 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms