Protein–RNA interactions for Protein: Q9CVD2

Atxn3, Ataxin-3, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn3Q9CVD2 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atxn3Q9CVD2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atxn3Q9CVD2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atxn3Q9CVD2 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atxn3Q9CVD2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atxn3Q9CVD2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atxn3Q9CVD2 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atxn3Q9CVD2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atxn3Q9CVD2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atxn3Q9CVD2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Zscan30-202ENSMUST00000224144 1458 ntBASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Gm8213-201ENSMUST00000118191 441 ntBASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atxn3Q9CVD2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Gm16202-201ENSMUST00000117532 544 ntBASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Gm27331-201ENSMUST00000183705 60 ntBASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Gm27847-201ENSMUST00000183711 107 ntBASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Gm27375-201ENSMUST00000183799 107 ntBASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Gm6266-201ENSMUST00000203844 806 ntBASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Atxn3Q9CVD2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 Gm29127-201ENSMUST00000188304 517 ntBASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 Gm42442-201ENSMUST00000197951 1133 ntBASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 Gm14608-201ENSMUST00000120030 1553 ntBASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Atxn3Q9CVD2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atxn3Q9CVD2 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atxn3Q9CVD2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atxn3Q9CVD2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Atxn3Q9CVD2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms