Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Gm1335-201ENSMUST00000121653 386 ntBASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Gm8062-201ENSMUST00000139696 444 ntBASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Gm37424-201ENSMUST00000191727 561 ntBASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Gm43630-201ENSMUST00000201550 776 ntBASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lsm7Q9CQQ8 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Lsm7Q9CQQ8 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Lsm7Q9CQQ8 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.27
Lsm7Q9CQQ8 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Gm10146-201ENSMUST00000072739 309 ntBASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm7Q9CQQ8 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms