Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Gm17870-201ENSMUST00000219489 1174 ntBASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H2afb1Q9CQ70 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Gm44872-201ENSMUST00000207864 420 ntBASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Gm9797-201ENSMUST00000052902 613 ntBASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
H2afb1Q9CQ70 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Gm11524-201ENSMUST00000119349 807 ntBASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Gm43094-201ENSMUST00000196549 921 ntBASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Gm19078-201ENSMUST00000206311 727 ntBASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H2afb1Q9CQ70 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms