Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim8Q99PJ2 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Mir449b-201ENSMUST00000104833 80 ntBASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Gm15678-201ENSMUST00000117573 960 ntBASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Auts2-212ENSMUST00000178555 309 ntBASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Gm27622-201ENSMUST00000183779 60 ntBASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Gm10253-201ENSMUST00000194270 940 ntBASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Gm44872-201ENSMUST00000207864 420 ntBASIC13.05□□□□□ -0.32
Trim8Q99PJ2 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim8Q99PJ2 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Gm9229-201ENSMUST00000222777 126 ntBASIC13.04□□□□□ -0.32
Trim8Q99PJ2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim8Q99PJ2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim8Q99PJ2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms